EnhancerDB
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  3. rs28568800[chr16:88354827]
Enhancers that have rs28568800[chr16:88354827]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88327201 88357367 enh16902
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Lung (PC-9) Esophagus Astrocyte Bone (Osteoblast) Lung (A549) Placenta Muscle (Myoblast) Pancreas Spleen Muscle (Myotube) Uterus
Transcript factors that have rs28568800[chr16:88354827]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88354817 88355181 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21736020
chr16 88354825 88354845 TP63 JASPAR yes 12278546
chr16 88354826 88354844 TP53 JASPAR yes 12278547
chr16 88354826 88354844 TP63 JASPAR yes 12278548
chr16 88354827 88354847 TP53 JASPAR yes 12278549
Genes associated with rs28568800[chr16:88354827], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More