EnhancerDB
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  3. rs28570404[chr16:28198512]
Enhancers that have rs28570404[chr16:28198512]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 28190945 28218035 enh3961
Skin (Keratinocyte) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Blood (OCI-LY7) Blood (GM12878) Stomach Muscle (A673) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Thymus Epithelial (MCF-7)
Transcript factors that have rs28570404[chr16:28198512]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 28198512 28198516 H1TF2 TRANSFAC yes 10220491
chr16 28198512 28198516 NFE TRANSFAC yes 10220492
chr16 28198512 28198516 SRF TRANSFAC yes 10220493
Genes associated with rs28570404[chr16:28198512], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More