EnhancerDB
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  3. rs28610049[chr18:57617896]
Enhancers that have rs28610049[chr18:57617896]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 57615485 57630775 enh4882
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (OCI-LY7) Lung (A549) Blood (GM12878) Stomach Placenta Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Muscle (Myotube) Epithelial (MCF-7)
Transcript factors that have rs28610049[chr18:57617896]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 57617629 57618145 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21825398
chr18 57617641 57618237 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21825399
chr18 57617758 57618088 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21825400
chr18 57617797 57618073 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21825401
chr18 57617806 57618076 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21825402
chr18 57617806 57618182 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21825403
chr18 57617857 57618041 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21825404
chr18 57617860 57618120 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21825405
chr18 57617888 57617899 STAT1 JASPAR yes 111067268
chr18 57617888 57617899 STAT3 JASPAR yes 111067269
chr18 57617890 57617911 IRF1 JASPAR yes 111067270
chr18 57617891 57617901 NFATC3 JASPAR yes 111067271
chr18 57617892 57617907 IRF9 JASPAR yes 111067272
chr18 57617893 57617907 IRF7 JASPAR yes 111067273
chr18 57617893 57617907 IRF8 JASPAR yes 111067274
chr18 57617894 57617908 STAT1 JASPAR yes 111067275
chr18 57617894 57617909 STAT2 JASPAR yes 111067276
Genes associated with rs28610049[chr18:57617896], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More