EnhancerDB
  1. Home
  2. SNP
  3. rs28669790[chr2:238837900]
Enhancers that have rs28669790[chr2:238837900]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 238823877 238854377 enh19404
Bone Marrow (K562) Brain (SK-N-SH) Epithelial (MCF-7) Prostate (RWPE1) Lung (PC-9) Esophagus Stomach Placenta Colon (HCT116) Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Pancreas (Panc1) Muscle (Myotube) Uterus Blood (T-cell) Heart
Transcript factors that have rs28669790[chr2:238837900]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 238837893 238837902 SNAI2 JASPAR yes 82148857
chr2 238837893 238837903 ID4 JASPAR yes 82148858
chr2 238837893 238837903 TCF3 JASPAR yes 82148859
chr2 238837893 238837903 TCF4 JASPAR yes 82148860
chr2 238837899 238837916 ZNF410 JASPAR yes 82148861
Genes associated with rs28669790[chr2:238837900], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More