EnhancerDB
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  3. rs28685302[chr17:30846334]
Enhancers that have rs28685302[chr17:30846334]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 30840656 30854616 enh17103
Large Intestine Prostate (RWPE1) Blood (T-cell) Astrocyte Blood (GM12878) Placenta Peripheral Blood (MM.1S) Uterus Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Thymus
Transcript factors that have rs28685302[chr17:30846334]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 30845798 30846468 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108250166
chr17 30846284 30846660 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108250167
chr17 30846330 30846342 TFAP2A JASPAR yes 53886750
chr17 30846330 30846342 TFAP2B JASPAR yes 53886751
chr17 30846330 30846342 TFAP2C JASPAR yes 53886752
chr17 30846331 30846821 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108250168
chr17 30846332 30846341 TFAP2A JASPAR yes 53886753
Genes associated with rs28685302[chr17:30846334], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More