EnhancerDB
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  3. rs28685609[chr18:56225016]
Enhancers that have rs28685609[chr18:56225016]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 56213245 56242835 enh4870
Astrocyte Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Lung (A549) Peripheral Blood (MM.1S) Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs28685609[chr18:56225016]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 56225008 56225020 TFAP2A JASPAR yes 110958852
chr18 56225008 56225020 TFAP2B JASPAR yes 110958853
chr18 56225008 56225020 TFAP2C JASPAR yes 110958854
chr18 56225008 56225023 TFAP2A JASPAR yes 110958855
chr18 56225010 56225019 TFAP2A JASPAR yes 110958856
chr18 56225015 56225019 LFA1 TRANSFAC yes 110958857
Genes associated with rs28685609[chr18:56225016], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More