EnhancerDB
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  3. rs28687820[chr4:114553796]
Enhancers that have rs28687820[chr4:114553796]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr4 114547985 114569854 enh8156
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs28687820[chr4:114553796]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr4 114553776 114553797 IRF1 JASPAR yes 92178646
chr4 114553778 114553799 IRF1 JASPAR yes 92178648
chr4 114553782 114553797 FOXP1 JASPAR yes 92178649
chr4 114553790 114553802 IRF1 JASPAR yes 92178650
chr4 114553790 114553804 TCF7L2 JASPAR yes 92178651
chr4 114553790 114553805 LEF1 JASPAR yes 92178652
chr4 114553794 114553802 LEF1 TRANSFAC yes 92178653
Genes associated with rs28687820[chr4:114553796], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More