EnhancerDB
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  3. rs28736699[chr15:40347435]
Enhancers that have rs28736699[chr15:40347435]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 40334765 40353183 enh16060
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs28736699[chr15:40347435]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 40344689 40349243 AR GTRD no Prostate (PC-3) 21649476
chr15 40344689 40349243 AR GTRD no Prostate (PC-3) 108133763
chr15 40346635 40349469 ZNF143 GTRD no Epithelial (MCF-7) 21649483
chr15 40346635 40349469 ZNF143 GTRD no Epithelial (MCF-7) 108133770
chr15 40346788 40347472 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21649487
chr15 40346788 40347472 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108133775
chr15 40346861 40347451 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21649489
chr15 40346861 40347451 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108133777
chr15 40346980 40347636 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21649509
chr15 40346980 40347636 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108133801
chr15 40346992 40347496 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21649511
chr15 40346992 40347496 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108133804
chr15 40347081 40348064 TCF7L2 GTRD no Colon (HCT116) 21649520
chr15 40347081 40348064 TCF7L2 GTRD no Colon (HCT116) 108133813
chr15 40347174 40348108 TCF7L2 GTRD no Colon (HCT116) 21649523
chr15 40347181 40348082 TCF7L2 GTRD no Colon (HCT116) 21649524
chr15 40347307 40347963 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21649525
Genes associated with rs28736699[chr15:40347435], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More