EnhancerDB
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  3. rs28742979[chr17:78801687]
Enhancers that have rs28742979[chr17:78801687]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 78797749 78810595 enh4639
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Stomach Muscle (A673) Placenta Colon (HCT116) Breast Blood (Karpas-422) Lung (PC-9) Pancreas Uterus Thymus Epithelial (MCF-7)
Transcript factors that have rs28742979[chr17:78801687]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 78801100 78801836 P63 GTRD no Skin (Keratinocyte) 108307660
chr17 78801681 78801691 HOXD11 JASPAR yes 56284040
chr17 78801681 78801692 HOXC12 JASPAR yes 56284041
chr17 78801687 78801691 NFE TRANSFAC yes 56284042
Genes associated with rs28742979[chr17:78801687], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More