EnhancerDB
  1. Home
  2. SNP
  3. rs28754590[chr16:88281821]
Enhancers that have rs28754590[chr16:88281821]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88258045 88283355 enh32027
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Ovary Lung (PC-9) Bone (Osteoblast) Stomach Colon (HCT116) Brain (SK-N-SH) Muscle (Myoblast) Pancreas Spleen Muscle (Myotube) Uterus Heart
Transcript factors that have rs28754590[chr16:88281821]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88278356 88283448 ZNF143 GTRD no Epithelial (MCF-7) 21735620
chr16 88281125 88282823 ZNF143 GTRD no Epithelial (MCF-7) 21735637
chr16 88281476 88283271 ZNF274 GTRD no Cervix (HeLa-S3) 21735638
chr16 88281683 88282910 ZNF274 GTRD no Cervix (HeLa-S3) 21735639
chr16 88281702 88282922 ZNF274 GTRD no Cervix (HeLa-S3) 21735640
chr16 88281710 88282811 ZNF274 GTRD no Cervix (HeLa-S3) 21735641
chr16 88281713 88283270 ZNF274 GTRD no Cervix (HeLa-S3) 21735642
chr16 88281716 88282223 ZNF274 GTRD no Cervix (HeLa-S3) 21735643
chr16 88281767 88282798 ZNF274 GTRD no Cervix (HeLa-S3) 21735644
chr16 88281803 88283101 ZNF274 GTRD no Cervix (HeLa-S3) 21735645
chr16 88281806 88282219 ZNF274 GTRD no Liver (HepG2) 21735646
chr16 88281812 88283000 ZNF274 GTRD no Cervix (HeLa-S3) 21735647
Genes associated with rs28754590[chr16:88281821], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More