EnhancerDB
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  3. rs2879180[chr2:28587689]
Enhancers that have rs2879180[chr2:28587689]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 28576025 28608635 enh18385
Bone Marrow (K562) Liver Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Heart
Transcript factors that have rs2879180[chr2:28587689]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 28587678 28587693 RFX5 JASPAR yes 72642406
chr2 28587682 28587697 RUNX2 JASPAR yes 72642407
Genes associated with rs2879180[chr2:28587689], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More