EnhancerDB
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  3. rs2880486[chr16:24527550]
Enhancers that have rs2880486[chr16:24527550]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 24526315 24540855 enh16608
Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Stomach Placenta Lung (PC-9) Uterus Epithelial (MCF-7)
Transcript factors that have rs2880486[chr16:24527550]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 24524410 24527593 ZNF274 GTRD no Cervix (HeLa-S3) 21698890
chr16 24524410 24527593 ZNF274 GTRD no Cervix (HeLa-S3) 21698891
chr16 24525700 24527630 ZNF274 GTRD no Cervix (HeLa-S3) 21698897
chr16 24526970 24527709 ZNF274 GTRD no Cervix (HeLa-S3) 21698934
chr16 24526990 24527641 ZNF274 GTRD no Cervix (HeLa-S3) 21698935
chr16 24527152 24527637 ZNF274 GTRD no Cervix (HeLa-S3) 21698936
chr16 24527542 24527552 ALX3 JASPAR yes 10069076
chr16 24527542 24527552 GSX1 JASPAR yes 10069077
chr16 24527542 24527552 GSX2 JASPAR yes 10069078
chr16 24527542 24527552 HOXB2 JASPAR yes 10069079
chr16 24527542 24527552 HOXB3 JASPAR yes 10069080
chr16 24527542 24527552 MEOX2 JASPAR yes 10069081
chr16 24527542 24527552 MIXL1 JASPAR yes 10069082
chr16 24527542 24527552 MNX1 JASPAR yes 10069083
chr16 24527542 24527553 HOXA10 JASPAR yes 10069084
chr16 24527543 24527551 LMX1A JASPAR yes 10069085
chr16 24527543 24527551 LMX1B JASPAR yes 10069086
chr16 24527543 24527551 NKX6-1 JASPAR yes 10069087
chr16 24527543 24527551 NKX6-2 JASPAR yes 10069088
chr16 24527543 24527551 PDX1 JASPAR yes 10069089
chr16 24527543 24527551 VAX1 JASPAR yes 10069090
chr16 24527543 24527551 VAX2 JASPAR yes 10069091
chr16 24527543 24527551 VSX1 JASPAR yes 10069092
chr16 24527543 24527553 HOXD13 JASPAR yes 10069093
Genes associated with rs2880486[chr16:24527550], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More