EnhancerDB
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  3. rs2882929[chr2:204449959]
Enhancers that have rs2882929[chr2:204449959]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 204433605 204453715 enh6121
Brain (SK-N-MC) Astrocyte Blood (Karpas-422) Pancreas Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Lung
Transcript factors that have rs2882929[chr2:204449959]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 204449938 204449959 IRF1 JASPAR yes 80242775
chr2 204449939 204449960 IRF1 JASPAR yes 80242776
chr2 204449943 204449964 IRF1 JASPAR yes 80242782
chr2 204449944 204449959 FOXP1 JASPAR yes 80242783
chr2 204449945 204449960 FOXP1 JASPAR yes 80242784
chr2 204449945 204449966 IRF1 JASPAR yes 80242785
chr2 204449946 204449961 FOXP1 JASPAR yes 80242786
chr2 204449949 204449964 STAT2 JASPAR yes 80242787
Genes associated with rs2882929[chr2:204449959], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More