EnhancerDB
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  3. rs28878270[chr4:89099845]
Enhancers that have rs28878270[chr4:89099845]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr4 89096939 89101889 enh21675
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Neural Stem Cells (H9) Epithelial (MCF-7)
chr4 89099576 89099877 vista45359
VISTA
Transcript factors that have rs28878270[chr4:89099845]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr4 89099838 89099853 TFAP2A JASPAR yes 49256934
chr4 89099838 89099853 TFAP2A JASPAR yes 91155592
chr4 89099841 89099853 TFAP2A JASPAR yes 49256935
chr4 89099841 89099853 TFAP2B JASPAR yes 49256936
chr4 89099841 89099853 TFAP2C JASPAR yes 49256937
chr4 89099841 89099853 TFAP2A JASPAR yes 91155593
chr4 89099841 89099853 TFAP2B JASPAR yes 91155594
chr4 89099841 89099853 TFAP2C JASPAR yes 91155595
Genes associated with rs28878270[chr4:89099845], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More