EnhancerDB
  1. Home
  2. SNP
  3. rs2888827[chr12:104999378]
Enhancers that have rs2888827[chr12:104999378]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 104958166 105005515 enh2574
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Kidney Epithelial (MCF-7) Stomach Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Heart
Transcript factors that have rs2888827[chr12:104999378]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 104998469 104999691 ZNF143 GTRD no Epithelial (MCF-7) 21569564
chr12 104998469 104999691 ZNF143 GTRD no Epithelial (MCF-7) 108055442
chr12 104998469 104999691 ZNF143 GTRD no Epithelial (MCF-7) 108055443
chr12 104998505 104999523 ZNF143 GTRD no Epithelial (MCF-7) 21569567
chr12 104998505 104999523 ZNF143 GTRD no Epithelial (MCF-7) 108055447
chr12 104998553 104999538 ZNF143 GTRD no Epithelial (MCF-7) 21569569
chr12 104998553 104999538 ZNF143 GTRD no Epithelial (MCF-7) 108055449
chr12 104998566 104999645 ZNF143 GTRD no Epithelial (MCF-7) 21569570
chr12 104998566 104999645 ZNF143 GTRD no Epithelial (MCF-7) 108055450
chr12 104998566 104999645 ZNF143 GTRD no Epithelial (MCF-7) 108055451
chr12 104998591 104999482 ZBTB33 GTRD no Lung (A549) 108055452
chr12 104998670 104999581 ZNF143 GTRD no Epithelial (MCF-7) 21569572
chr12 104998670 104999581 ZNF143 GTRD no Epithelial (MCF-7) 108055454
chr12 104998712 104999495 TCF7L2 GTRD no Colon (HCT116) 21569573
chr12 104998712 104999495 TCF7L2 GTRD no Colon (HCT116) 108055455
chr12 104998722 104999632 ZNF143 GTRD no Epithelial (MCF-7) 21569574
chr12 104998722 104999632 ZNF143 GTRD no Epithelial (MCF-7) 108055456
chr12 104998722 104999632 ZNF143 GTRD no Epithelial (MCF-7) 108055457
chr12 104998773 104999472 ZNF143 GTRD no Epithelial (MCF-7) 21569577
chr12 104998773 104999472 ZNF143 GTRD no Epithelial (MCF-7) 108055460
chr12 104998780 104999557 ZNF143 GTRD no Epithelial (MCF-7) 21569578
chr12 104998780 104999557 ZNF143 GTRD no Epithelial (MCF-7) 108055462
chr12 104998785 104999589 ZNF143 GTRD no Epithelial (MCF-7) 21569579
chr12 104998785 104999589 ZNF143 GTRD no Epithelial (MCF-7) 108055463
chr12 104998785 104999589 ZNF143 GTRD no Epithelial (MCF-7) 108055464
chr12 104998882 104999390 ZNF143 GTRD no Epithelial (MCF-7) 21569581
chr12 104998882 104999390 ZNF143 GTRD no Epithelial (MCF-7) 108055466
chr12 104999360 104999381 IRF1 JASPAR yes 123397916
chr12 104999362 104999838 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21569582
chr12 104999362 104999838 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108055467
chr12 104999364 104999379 FOXP1 JASPAR yes 123397918
chr12 104999366 104999381 FOXP1 JASPAR yes 123397919
chr12 104999366 104999381 MEF2C JASPAR yes 123397920
chr12 104999366 104999387 IRF1 JASPAR yes 123397921
chr12 104999367 104999382 FOXP1 JASPAR yes 123397922
Genes associated with rs2888827[chr12:104999378], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More