EnhancerDB
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  3. rs2894516[chr2:224712658]
Enhancers that have rs2894516[chr2:224712658]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 224709233 224738255 enh19264
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Muscle (A673) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Pancreas (Panc1) Blood (T-cell) Stomach
Transcript factors that have rs2894516[chr2:224712658]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 224712649 224712660 CDX2 JASPAR yes 81293458
chr2 224712649 224712660 RUNX1 JASPAR yes 81293459
chr2 224712654 224712668 RXRB JASPAR yes 81293460
chr2 224712654 224712668 RXRG JASPAR yes 81293461
chr2 224712655 224712665 HOXB13 JASPAR yes 81293462
Genes associated with rs2894516[chr2:224712658], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More