EnhancerDB
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  3. rs2898986[chr15:40335860]
Enhancers that have rs2898986[chr15:40335860]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 40334765 40353183 enh16060
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs2898986[chr15:40335860]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 40334337 40336013 ZNF143 GTRD no Epithelial (MCF-7) 21649103
chr15 40334504 40335876 ZNF143 GTRD no Epithelial (MCF-7) 21649108
chr15 40335055 40336331 TCF7L2 GTRD no Colon (HCT116) 21649141
chr15 40335608 40336825 TCF7L2 GTRD no Colon (HCT116) 21649142
chr15 40335857 40335865 FOXL1 JASPAR yes 22922257
Genes associated with rs2898986[chr15:40335860], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More