EnhancerDB
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  3. rs2939958[chr16:4997323]
Enhancers that have rs2939958[chr16:4997323]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 4988771 5002255 enh16521
Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Heart
Transcript factors that have rs2939958[chr16:4997323]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 4997313 4997328 HNF1A JASPAR yes 9293815
chr16 4997314 4997326 HNF1B JASPAR yes 9293816
chr16 4997314 4997327 HNF1B JASPAR yes 9293817
chr16 4997316 4997331 FOXA1 JASPAR yes 9293818
chr16 4997318 4997330 FOXC2 JASPAR yes 9293819
chr16 4997319 4997330 FOXB1 JASPAR yes 9293820
chr16 4997319 4997330 FOXC1 JASPAR yes 9293821
chr16 4997320 4997324 YY1 TRANSFAC yes 9293822
Genes associated with rs2939958[chr16:4997323], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More