EnhancerDB
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  3. rs2966847[chr16:85178730]
Enhancers that have rs2966847[chr16:85178730]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85155669 85199515 enh16863
Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs2966847[chr16:85178730]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85176962 85179369 ZNF143 GTRD no Epithelial (MCF-7) 21720349
chr16 85177754 85179582 ZNF143 GTRD no Epithelial (MCF-7) 21720350
chr16 85177989 85178980 ZNF143 GTRD no Epithelial (MCF-7) 21720353
chr16 85178093 85178995 ZNF143 GTRD no Epithelial (MCF-7) 21720356
chr16 85178721 85178735 BATF3 JASPAR yes 12024881
chr16 85178721 85178738 RARA JASPAR yes 12024882
chr16 85178721 85178738 RXRA JASPAR yes 12024883
chr16 85178724 85178732 CREB1 JASPAR yes 12024885
chr16 85178726 85178731 ATF1 TRANSFAC yes 12024886
chr16 85178728 85178738 RORA JASPAR yes 12024887
chr16 85178729 85178740 ESRRA JASPAR yes 12024888
chr16 85178729 85178740 ESRRB JASPAR yes 12024889
chr16 85178730 85178741 FOXA1 JASPAR yes 12024890
chr16 85178730 85178745 FOXA1 JASPAR yes 12024891
Genes associated with rs2966847[chr16:85178730], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More