EnhancerDB
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  3. rs297143[chr2:39320067]
Enhancers that have rs297143[chr2:39320067]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 39316774 39331447 enh5437
Prostate (PC-3) Brain (SK-N-SH) Large Intestine Blood (OCI-LY7) Blood (GM12878) Stomach Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Spleen Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs297143[chr2:39320067]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 39320047 39320068 IRF1 JASPAR yes 73180724
chr2 39320053 39320067 POU1F1 JASPAR yes 73180727
chr2 39320054 39320067 POU2F2 JASPAR yes 73180729
chr2 39320055 39320070 IRF9 JASPAR yes 73180730
chr2 39320056 39320070 IRF8 JASPAR yes 73180731
chr2 39320059 39320072 POU3F3 JASPAR yes 73180732
chr2 39320060 39320072 POU3F2 JASPAR yes 73180733
Genes associated with rs297143[chr2:39320067], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More