EnhancerDB
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  3. rs2971438[chr1:2227166]
Enhancers that have rs2971438[chr1:2227166]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 2213745 2234616 enh11425
Brain (SK-N-SH) Brain (SK-N-MC) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Lung Stomach Muscle (A673) Placenta Thyroid Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Muscle (Myotube) Uterus Thymus Heart
Transcript factors that have rs2971438[chr1:2227166]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 2226394 2230712 TCF7L2 GTRD no Colon (HCT116) 107801818
chr1 2226395 2235066 ZNF274 GTRD no Bone Marrow (K562) 107801819
chr1 2226395 2235066 ZNF274 GTRD no Bone Marrow (K562) 107801820
chr1 2227166 2227176 MAX JASPAR yes 26233108
chr1 2227166 2227177 USF1 JASPAR yes 26233109
chr1 2227166 2227178 HES5 JASPAR yes 26233110
Genes associated with rs2971438[chr1:2227166], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More