EnhancerDB
  1. Home
  2. SNP
  3. rs2972276[chr16:4988946]
Enhancers that have rs2972276[chr16:4988946]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 4988771 5002255 enh16521
Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Heart
Transcript factors that have rs2972276[chr16:4988946]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 4988934 4988955 REST JASPAR yes 9292293
chr16 4988935 4988954 REST JASPAR yes 9292294
chr16 4988944 4988954 SP1 JASPAR yes 9292296
chr16 4988945 4988949 LFA1 TRANSFAC yes 9292297
Genes associated with rs2972276[chr16:4988946], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More