EnhancerDB
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  3. rs2996646[chr1:17870786]
Enhancers that have rs2996646[chr1:17870786]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 17869605 17883659 enh26559
Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-SH) Large Intestine Esophagus Astrocyte Bone (Osteoblast) Stomach Muscle (A673) Colon (HCT116) Peripheral Blood (MM.1S) Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Pancreas Neural Stem Cells (H9) Heart
Transcript factors that have rs2996646[chr1:17870786]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 17870775 17870786 FOXB1 JASPAR yes 27099577
chr1 17870776 17870787 FOXB1 JASPAR yes 27099578
chr1 17870778 17870788 MEF2A JASPAR yes 27099580
chr1 17870779 17870787 FOXL1 JASPAR yes 27099581
chr1 17870783 17870787 TEAD2 TRANSFAC yes 27099582
Genes associated with rs2996646[chr1:17870786], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More