EnhancerDB
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  3. rs3028106[chr5:171592797]
Enhancers that have rs3028106[chr5:171592797]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 171565199 171613524 enh8878
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs3028106[chr5:171592797]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 171592780 171592800 RREB1 JASPAR yes 67770387
chr5 171592786 171592801 FOXA1 JASPAR yes 67770388
chr5 171592788 171592800 FOXC2 JASPAR yes 67770389
chr5 171592789 171592800 FOXC1 JASPAR yes 67770390
chr5 171592790 171592801 FOXA1 JASPAR yes 67770391
chr5 171592791 171592812 IRF1 JASPAR yes 67770392
chr5 171592792 171592813 IRF1 JASPAR yes 67770393
chr5 171592793 171592808 STAT2 JASPAR yes 67770394
chr5 171592796 171592811 FOXP1 JASPAR yes 67770395
chr5 171592797 171592812 FOXP1 JASPAR yes 67770396
Genes associated with rs3028106[chr5:171592797], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More