EnhancerDB
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Enhancers that have rs3052269[chr15:58802158]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 58795205 58823435 enh16178
Bone Marrow (K562) Liver Astrocyte Pancreas Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Lung (A549) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Muscle (A673) Heart
Transcript factors that have rs3052269[chr15:58802158]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 58802146 58802159 ATF4 JASPAR yes 23681837
chr15 58802147 58802162 HNF1A JASPAR yes 23681839
chr15 58802148 58802164 POU4F3 JASPAR yes 23681840
chr15 58802151 58802162 HOXC11 JASPAR yes 23681842
chr15 58802151 58802162 HOXD12 JASPAR yes 23681843
chr15 58802152 58802162 HOXC10 JASPAR yes 23681844
chr15 58802152 58802162 HOXD11 JASPAR yes 23681845
chr15 58802154 58802158 YY1 TRANSFAC yes 23681846
chr15 58802155 58802170 FOXP1 JASPAR yes 23681847
chr15 58802157 58802163 TBP TRANSFAC yes 23681848
chr15 58802157 58802172 FOXP1 JASPAR yes 23681849
Genes associated with rs3052269[chr15:58802158], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More