EnhancerDB
  1. Home
  2. SNP
  3. rs3079778[chr1:180889857]
Enhancers that have rs3079778[chr1:180889857]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 180889388 180897070 enh12427
Liver (HepG2) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Stomach Muscle (A673) Placenta Thyroid Embryonic Stem Cell Line (H1-hESC) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Heart
Transcript factors that have rs3079778[chr1:180889857]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 180889837 180889857 RREB1 JASPAR yes 33541532
chr1 180889848 180889860 INSM1 JASPAR yes 33541539
chr1 180889848 180889868 RREB1 JASPAR yes 33541540
chr1 180889853 180889860 SP1 TRANSFAC yes 33541541
chr1 180889853 180889863 SP1 JASPAR yes 33541542
chr1 180889854 180889862 SP1 TRANSFAC yes 33541543
chr1 180889854 180889864 SP1 JASPAR yes 33541544
chr1 180889855 180889860 SP1 TRANSFAC yes 33541545
chr1 180889855 180889875 TP63 JASPAR yes 33541546
chr1 180889856 180889861 SP1 TRANSFAC yes 33541547
Genes associated with rs3079778[chr1:180889857], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More