EnhancerDB
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  3. rs3103578[chr5:171540210]
Enhancers that have rs3103578[chr5:171540210]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 171526400 171541439 enh8877
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Breast Muscle (Myoblast) Prostate (RWPE1) Lung Heart
Transcript factors that have rs3103578[chr5:171540210]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 171540040 171540361 RUNX3 UCSC Txn Factor no Conserved 108537427
chr5 171540071 171540387 EBF1 UCSC Txn Factor no Conserved 108537428
chr5 171540208 171540222 MTF1 JASPAR yes 67763787
Genes associated with rs3103578[chr5:171540210], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More