EnhancerDB
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  3. rs3103580[chr5:171538737]
Enhancers that have rs3103580[chr5:171538737]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 171526400 171541439 enh8877
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Breast Muscle (Myoblast) Prostate (RWPE1) Lung Heart
Transcript factors that have rs3103580[chr5:171538737]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 171538728 171538739 NFKB1 JASPAR yes 67763534
chr5 171538729 171538743 POU1F1 JASPAR yes 67763535
chr5 171538729 171538746 BCL6B JASPAR yes 67763536
chr5 171538730 171538742 POU3F1 JASPAR yes 67763537
chr5 171538730 171538742 POU3F2 JASPAR yes 67763538
chr5 171538730 171538743 POU3F3 JASPAR yes 67763539
chr5 171538731 171538741 NFATC3 JASPAR yes 67763540
chr5 171538731 171538743 POU2F1 JASPAR yes 67763541
chr5 171538732 171538741 POU3F4 JASPAR yes 67763542
chr5 171538732 171538741 POU5F1B JASPAR yes 67763543
Genes associated with rs3103580[chr5:171538737], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More