EnhancerDB
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  3. rs3111484[chr5:171532397]
Enhancers that have rs3111484[chr5:171532397]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 171526400 171541439 enh8877
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Breast Muscle (Myoblast) Prostate (RWPE1) Lung Heart
Transcript factors that have rs3111484[chr5:171532397]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 171532384 171532398 GLIS2 JASPAR yes 67763047
chr5 171532384 171532398 GLIS3 JASPAR yes 67763048
chr5 171532384 171532398 ZIC1 JASPAR yes 67763049
chr5 171532384 171532399 ZIC3 JASPAR yes 67763050
chr5 171532384 171532399 ZIC4 JASPAR yes 67763051
Genes associated with rs3111484[chr5:171532397], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More