EnhancerDB
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  3. rs3111496[chr5:171538376]
Enhancers that have rs3111496[chr5:171538376]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 171526400 171541439 enh8877
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Breast Muscle (Myoblast) Prostate (RWPE1) Lung Heart
Transcript factors that have rs3111496[chr5:171538376]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 171538368 171538382 STAT1 JASPAR yes 67763469
chr5 171538370 171538391 IRF1 JASPAR yes 67763470
chr5 171538372 171538387 IRF9 JASPAR yes 67763471
chr5 171538373 171538387 IRF8 JASPAR yes 67763472
chr5 171538374 171538388 STAT1 JASPAR yes 67763473
chr5 171538374 171538389 STAT2 JASPAR yes 67763474
Genes associated with rs3111496[chr5:171538376], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More