EnhancerDB
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  3. rs3125252[chr1:53636616]
Enhancers that have rs3125252[chr1:53636616]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 53634965 53653615 enh11857
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Ovary Esophagus Liver Bone (Osteoblast) Placenta Pancreas Pancreas (Panc1) Muscle (Myotube) Uterus Stomach
Transcript factors that have rs3125252[chr1:53636616]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 53636616 53636624 NR4A2 JASPAR yes 28917678
chr1 53636616 53636629 EOMES JASPAR yes 28917679
Genes associated with rs3125252[chr1:53636616], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 53392901 53517375 + SCP2 ENSG00000116171.12 53392901 119241 Pancreas 0.175971 707