EnhancerDB
  1. Home
  2. SNP
  3. rs3130039[chr6:30500536]
Enhancers that have rs3130039[chr6:30500536]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 30493525 30503995 enh38943
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Blood (T-cell) Stomach
Transcript factors that have rs3130039[chr6:30500536]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 30500527 30500545 ESR2 JASPAR yes 101039811
chr6 30500536 30500544 MEIS2 JASPAR yes 101039812
chr6 30500536 30500544 MEIS3 JASPAR yes 101039813
Genes associated with rs3130039[chr6:30500536], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr6 30457244 30461982 + HLA-E ENSG00000204592.5 30457244 38554 Esophagus 0.0251344 6338