EnhancerDB
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  3. rs3169646[chr17:70399483]
Enhancers that have rs3169646[chr17:70399483]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 70352230 70433435 enh4580
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs3169646[chr17:70399483]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 70399482 70399496 POU4F1 JASPAR yes 55783796
chr17 70399483 70399493 GSX2 JASPAR yes 55783797
chr17 70399483 70399493 HOXB2 JASPAR yes 55783798
chr17 70399483 70399493 HOXB3 JASPAR yes 55783799
chr17 70399483 70399493 MNX1 JASPAR yes 55783800
chr17 70399483 70399493 POU6F1 JASPAR yes 55783801
Genes associated with rs3169646[chr17:70399483], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More