EnhancerDB
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  3. rs34090635[chr18:51916233]
Enhancers that have rs34090635[chr18:51916233]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 51910465 51921195 enh4845
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Muscle (A673) Placenta Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs34090635[chr18:51916233]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 51916216 51916233 BCL6B JASPAR yes 110714890
chr18 51916221 51916242 IRF1 JASPAR yes 110714891
chr18 51916223 51916238 PRDM1 JASPAR yes 110714892
chr18 51916223 51916238 STAT2 JASPAR yes 110714893
chr18 51916224 51916238 STAT1 JASPAR yes 110714894
chr18 51916225 51916237 IRF1 JASPAR yes 110714895
chr18 51916225 51916240 IRF9 JASPAR yes 110714896
chr18 51916233 51916248 FOXP1 JASPAR yes 110714897
Genes associated with rs34090635[chr18:51916233], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More