EnhancerDB
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  3. rs34353034[chr16:28200578]
Enhancers that have rs34353034[chr16:28200578]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 28190945 28218035 enh3961
Skin (Keratinocyte) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Blood (OCI-LY7) Blood (GM12878) Stomach Muscle (A673) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Thymus Epithelial (MCF-7)
Transcript factors that have rs34353034[chr16:28200578]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 28200567 28200578 FLI1 JASPAR yes 10220763
chr16 28200568 28200578 GABPA JASPAR yes 10220764
chr16 28200575 28200590 FOXP1 JASPAR yes 10220768
chr16 28200576 28200591 FOXP1 JASPAR yes 10220769
chr16 28200577 28200583 TBP TRANSFAC yes 10220770
chr16 28200577 28200592 FOXP1 JASPAR yes 10220771
chr16 28200578 28200593 FOXP1 JASPAR yes 10220772
chr16 28200578 28200599 IRF1 JASPAR yes 10220773
Genes associated with rs34353034[chr16:28200578], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More