EnhancerDB
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  3. rs34404427[chr16:375307]
Enhancers that have rs34404427[chr16:375307]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 364825 394775 enh16487
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Muscle (A673) Heart
Transcript factors that have rs34404427[chr16:375307]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 370916 375680 ZNF143 GTRD no Epithelial (MCF-7) 21683784
chr16 370916 375680 ZNF143 GTRD no Epithelial (MCF-7) 108170123
chr16 370916 375680 ZNF143 GTRD no Epithelial (MCF-7) 108170124
chr16 373533 375689 ZNF143 GTRD no Epithelial (MCF-7) 21683785
chr16 373533 375689 ZNF143 GTRD no Epithelial (MCF-7) 108170125
chr16 373533 375689 ZNF143 GTRD no Epithelial (MCF-7) 108170126
chr16 373783 375527 ZNF143 GTRD no Epithelial (MCF-7) 21683786
chr16 373783 375527 ZNF143 GTRD no Epithelial (MCF-7) 108170127
chr16 373783 375527 ZNF143 GTRD no Epithelial (MCF-7) 108170128
chr16 373921 375320 ZNF143 GTRD no Epithelial (MCF-7) 21683787
chr16 373921 375320 ZNF143 GTRD no Epithelial (MCF-7) 108170129
chr16 373921 375320 ZNF143 GTRD no Epithelial (MCF-7) 108170130
chr16 374583 375435 ZNF143 GTRD no Epithelial (MCF-7) 21683838
chr16 374583 375435 ZNF143 GTRD no Epithelial (MCF-7) 108170195
chr16 374583 375435 ZNF143 GTRD no Epithelial (MCF-7) 108170196
chr16 374838 375498 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108170203
chr16 374838 375498 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108170204
chr16 374859 375489 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108170205
chr16 374859 375489 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108170206
chr16 374905 375425 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108170210
chr16 374926 375341 ZNF274 GTRD no Liver (HepG2) 21683843
chr16 374926 375341 ZNF274 GTRD no Liver (HepG2) 108170212
chr16 374952 375319 RUNX3 UCSC Txn Factor no Conserved 108170214
chr16 374952 375319 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108170215
chr16 374988 375398 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108170217
chr16 374998 375318 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108170218
chr16 375038 375345 ELF1 UCSC Txn Factor no Conserved 108170219
chr16 375038 375345 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108170220
chr16 375047 375307 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108170222
chr16 375296 375315 CTCF JASPAR yes 9104678
chr16 375299 375313 GLIS2 JASPAR yes 9104679
chr16 375299 375313 ZIC1 JASPAR yes 9104680
chr16 375299 375314 ZIC3 JASPAR yes 9104681
chr16 375299 375314 ZIC4 JASPAR yes 9104682
Genes associated with rs34404427[chr16:375307], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More