EnhancerDB
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  3. rs34495058[chr17:70380442]
Enhancers that have rs34495058[chr17:70380442]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 70352230 70433435 enh4580
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs34495058[chr17:70380442]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 70380044 70380479 ZNF274 GTRD no Liver (HepG2) 21784406
chr17 70380436 70380457 IRF1 JASPAR yes 55781060
chr17 70380438 70380459 IRF1 JASPAR yes 55781061
chr17 70380439 70380460 IRF1 JASPAR yes 55781062
chr17 70380440 70380455 FOXP1 JASPAR yes 55781063
chr17 70380440 70380461 IRF1 JASPAR yes 55781064
chr17 70380441 70380456 FOXP1 JASPAR yes 55781065
chr17 70380441 70380462 IRF1 JASPAR yes 55781066
chr17 70380442 70380457 FOXP1 JASPAR yes 55781067
Genes associated with rs34495058[chr17:70380442], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More