EnhancerDB
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  3. rs34582955[chr1:16228409]
Enhancers that have rs34582955[chr1:16228409]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 16216545 16234615 enh82
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Blood (OCI-LY7) Muscle (A673) Placenta Colon (HCT116) Thyroid Pancreas (Panc1) Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Spleen Uterus Stomach
Transcript factors that have rs34582955[chr1:16228409]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 16227523 16228802 ZNF274 GTRD no Bone Marrow (K562) 107802205
chr1 16228392 16228413 IRF1 JASPAR yes 27013288
chr1 16228401 16228416 FOXP1 JASPAR yes 27013292
chr1 16228405 16228420 HNF1A JASPAR yes 27013293
chr1 16228407 16228414 NKX3-1 JASPAR yes 27013294
chr1 16228407 16228423 POU4F2 JASPAR yes 27013295
chr1 16228408 16228423 FOXA1 JASPAR yes 27013296
chr1 16228409 16228421 FOXI1 JASPAR yes 27013297
chr1 16228409 16228423 POU4F1 JASPAR yes 27013298
Genes associated with rs34582955[chr1:16228409], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More