EnhancerDB
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  3. rs34652842[chr2:201609556]
Enhancers that have rs34652842[chr2:201609556]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 201603725 201634495 enh19115
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Stomach Placenta Colon (HCT116) Breast Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Thymus Heart
Transcript factors that have rs34652842[chr2:201609556]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 201609550 201609571 IRF1 JASPAR yes 80123076
chr2 201609551 201609572 IRF1 JASPAR yes 80123077
chr2 201609552 201609564 FOXC2 JASPAR yes 80123078
chr2 201609552 201609567 STAT2 JASPAR yes 80123079
chr2 201609553 201609568 FOXP1 JASPAR yes 80123080
chr2 201609555 201609570 FOXP1 JASPAR yes 80123081
chr2 201609555 201609576 IRF1 JASPAR yes 80123082
chr2 201609556 201609571 FOXP1 JASPAR yes 80123083
Genes associated with rs34652842[chr2:201609556], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More