EnhancerDB
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  3. rs34680986[chr2:236419177]
Enhancers that have rs34680986[chr2:236419177]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 236405325 236429424 enh19364
Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs34680986[chr2:236419177]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 236419171 236419183 HES5 JASPAR yes 81976085
chr2 236419171 236419183 HES7 JASPAR yes 81976086
chr2 236419172 236419182 BHLHE40 JASPAR yes 81976087
chr2 236419172 236419182 BHLHE41 JASPAR yes 81976088
chr2 236419172 236419182 CLOCK JASPAR yes 81976089
chr2 236419172 236419182 HEY1 JASPAR yes 81976090
chr2 236419172 236419182 HEY2 JASPAR yes 81976091
chr2 236419172 236419182 MAX JASPAR yes 81976092
chr2 236419172 236419182 MLXIPL JASPAR yes 81976093
chr2 236419172 236419182 MLX JASPAR yes 81976094
chr2 236419172 236419182 MNT JASPAR yes 81976095
chr2 236419172 236419182 TFE3 JASPAR yes 81976096
chr2 236419172 236419182 TFEB JASPAR yes 81976097
chr2 236419172 236419182 TFEC JASPAR yes 81976098
chr2 236419173 236419183 MAX JASPAR yes 81976099
chr2 236419174 236419179 MYC TRANSFAC yes 81976100
chr2 236419174 236419179 USF1 TRANSFAC yes 81976101
chr2 236419174 236419179 USF2 TRANSFAC yes 81976102
chr2 236419175 236419196 IRF1 JASPAR yes 81976103
chr2 236419177 236419192 PRDM1 JASPAR yes 81976104
chr2 236419177 236419192 STAT2 JASPAR yes 81976105
Genes associated with rs34680986[chr2:236419177], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More