EnhancerDB
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  3. rs34820139[chr17:70376856]
Enhancers that have rs34820139[chr17:70376856]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 70352230 70433435 enh4580
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs34820139[chr17:70376856]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 70376851 70376866 MEF2C JASPAR yes 55780452
chr17 70376854 70376869 FOXP1 JASPAR yes 55780453
chr17 70376855 70376870 FOXP1 JASPAR yes 55780454
chr17 70376856 70376871 FOXP1 JASPAR yes 55780455
Genes associated with rs34820139[chr17:70376856], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More