EnhancerDB
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  3. rs34820632[chr6:41697860]
Enhancers that have rs34820632[chr6:41697860]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 41672005 41699742 enh9103
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs34820632[chr6:41697860]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 41697850 41697860 SREBF2 JASPAR yes 101670255
chr6 41697856 41697871 FOXP1 JASPAR yes 101670256
chr6 41697857 41697872 FOXP1 JASPAR yes 101670257
chr6 41697857 41697878 IRF1 JASPAR yes 101670258
chr6 41697858 41697873 FOXP1 JASPAR yes 101670259
Genes associated with rs34820632[chr6:41697860], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More