EnhancerDB
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  3. rs34826639[chr17:70401779]
Enhancers that have rs34826639[chr17:70401779]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 70352230 70433435 enh4580
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs34826639[chr17:70401779]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 70401768 70401786 RARA JASPAR yes 55784052
chr17 70401779 70401789 GSX2 JASPAR yes 55784053
chr17 70401779 70401789 HESX1 JASPAR yes 55784054
chr17 70401779 70401789 LBX2 JASPAR yes 55784055
chr17 70401779 70401789 MIXL1 JASPAR yes 55784056
chr17 70401779 70401789 MNX1 JASPAR yes 55784057
chr17 70401779 70401789 RAX JASPAR yes 55784058
Genes associated with rs34826639[chr17:70401779], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More