EnhancerDB
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  3. rs349309[chr19:952429]
Enhancers that have rs349309[chr19:952429]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 927725 963215 enh4948
Bone Marrow (K562) Liver (HepG2) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Astrocyte Bone (Osteoblast) Lung Blood (GM12878) Stomach Placenta Colon (HCT116) Thyroid Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Heart
Transcript factors that have rs349309[chr19:952429]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 950266 955932 ZNF274 GTRD no Blood (GM12878) 21830891
chr19 950266 955932 ZNF274 GTRD no Blood (GM12878) 108348556
chr19 950266 955932 ZNF274 GTRD no Blood (GM12878) 108348557
chr19 950266 955932 ZNF274 GTRD no Blood (GM12878) 108348558
chr19 950290 956659 ZNF274 GTRD no Blood (GM12878) 21830892
chr19 950290 956659 ZNF274 GTRD no Blood (GM12878) 108348559
chr19 950290 956659 ZNF274 GTRD no Blood (GM12878) 108348560
chr19 950290 956659 ZNF274 GTRD no Blood (GM12878) 108348561
chr19 950315 956778 ZNF274 GTRD no Blood (GM12878) 21830893
chr19 950315 956778 ZNF274 GTRD no Blood (GM12878) 108348562
chr19 950315 956778 ZNF274 GTRD no Blood (GM12878) 108348563
chr19 950315 956778 ZNF274 GTRD no Blood (GM12878) 108348564
chr19 950335 956670 ZNF274 GTRD no Blood (GM12878) 21830894
chr19 950335 956670 ZNF274 GTRD no Blood (GM12878) 108348565
chr19 950335 956670 ZNF274 GTRD no Blood (GM12878) 108348566
chr19 950335 956670 ZNF274 GTRD no Blood (GM12878) 108348567
chr19 951220 952429 TCF7L2 GTRD no Colon (HCT116) 21830896
chr19 951220 952429 TCF7L2 GTRD no Colon (HCT116) 108348569
chr19 951247 956675 ZNF274 GTRD no Blood (GM12878) 21830902
chr19 951247 956675 ZNF274 GTRD no Blood (GM12878) 108348575
chr19 951247 956675 ZNF274 GTRD no Blood (GM12878) 108348576
chr19 951247 956675 ZNF274 GTRD no Blood (GM12878) 108348577
chr19 951267 957008 ZNF274 GTRD no Blood (GM12878) 21830903
chr19 951267 957008 ZNF274 GTRD no Blood (GM12878) 108348578
chr19 951267 957008 ZNF274 GTRD no Blood (GM12878) 108348579
chr19 951267 957008 ZNF274 GTRD no Blood (GM12878) 108348580
chr19 951296 954539 ZNF274 GTRD no Liver (HepG2) 21830904
chr19 951296 954539 ZNF274 GTRD no Liver (HepG2) 108348581
chr19 951296 954539 ZNF274 GTRD no Liver (HepG2) 108348582
chr19 951301 952458 ZNF274 GTRD no Blood (GM12878) 21830905
chr19 951301 952458 ZNF274 GTRD no Blood (GM12878) 108348583
chr19 951309 952564 ZNF274 GTRD no Blood (GM12878) 21830906
chr19 951309 952564 ZNF274 GTRD no Blood (GM12878) 108348584
chr19 951322 952438 ZNF274 GTRD no Blood (GM12878) 21830907
chr19 951322 952438 ZNF274 GTRD no Blood (GM12878) 108348585
chr19 951325 953656 ZNF274 GTRD no Blood (GM12878) 21830908
chr19 951325 953656 ZNF274 GTRD no Blood (GM12878) 108348586
chr19 951325 953656 ZNF274 GTRD no Blood (GM12878) 108348587
chr19 951330 955609 ZNF274 GTRD no Bone Marrow (K562) 21830910
chr19 951330 955609 ZNF274 GTRD no Bone Marrow (K562) 108348589
chr19 951330 955609 ZNF274 GTRD no Bone Marrow (K562) 108348590
chr19 951330 955609 ZNF274 GTRD no Bone Marrow (K562) 108348591
chr19 951354 952529 ZNF274 GTRD no Blood (GM12878) 21830914
chr19 951354 952529 ZNF274 GTRD no Blood (GM12878) 108348595
chr19 951378 957589 ZNF274 GTRD no Bone Marrow (K562) 21830916
chr19 951378 957589 ZNF274 GTRD no Bone Marrow (K562) 108348597
chr19 951378 957589 ZNF274 GTRD no Bone Marrow (K562) 108348598
chr19 951378 957589 ZNF274 GTRD no Bone Marrow (K562) 108348599
chr19 951396 957117 ZNF274 GTRD no Bone Marrow (K562) 21830922
chr19 951396 957117 ZNF274 GTRD no Bone Marrow (K562) 108348605
chr19 951396 957117 ZNF274 GTRD no Bone Marrow (K562) 108348606
chr19 951396 957117 ZNF274 GTRD no Bone Marrow (K562) 108348607
chr19 951397 952436 ZNF274 GTRD no Bone Marrow (K562) 21830924
chr19 951397 952436 ZNF274 GTRD no Bone Marrow (K562) 108348609
chr19 951400 952434 ZNF274 GTRD no Blood (GM12878) 21830925
chr19 951400 952434 ZNF274 GTRD no Blood (GM12878) 108348610
chr19 951405 953257 ZNF274 GTRD no Blood (GM12878) 21830929
chr19 951405 953257 ZNF274 GTRD no Blood (GM12878) 108348614
chr19 951405 953257 ZNF274 GTRD no Blood (GM12878) 108348615
chr19 951408 954611 ZNF274 GTRD no Liver (HepG2) 21830932
chr19 951408 954611 ZNF274 GTRD no Liver (HepG2) 108348618
chr19 951408 954611 ZNF274 GTRD no Liver (HepG2) 108348619
chr19 951414 954061 ZNF274 GTRD no Liver (HepG2) 21830935
chr19 951414 954061 ZNF274 GTRD no Liver (HepG2) 108348622
chr19 951414 954061 ZNF274 GTRD no Liver (HepG2) 108348623
chr19 951434 952504 ZNF274 GTRD no Blood (GM12878) 21830941
chr19 951434 952504 ZNF274 GTRD no Blood (GM12878) 108348629
chr19 951516 953923 ZNF274 GTRD no Liver (HepG2) 21830958
chr19 951516 953923 ZNF274 GTRD no Liver (HepG2) 108348646
chr19 951516 953923 ZNF274 GTRD no Liver (HepG2) 108348647
chr19 951578 954223 ZNF274 GTRD no Liver (HepG2) 21830974
chr19 951578 954223 ZNF274 GTRD no Liver (HepG2) 108348664
chr19 951578 954223 ZNF274 GTRD no Liver (HepG2) 108348665
chr19 951624 954113 ZNF274 GTRD no Liver (HepG2) 21830988
chr19 951624 954113 ZNF274 GTRD no Liver (HepG2) 108348679
chr19 951624 954113 ZNF274 GTRD no Liver (HepG2) 108348680
chr19 951922 953907 ZNF274 GTRD no Liver (HepG2) 21830997
chr19 951922 953907 ZNF274 GTRD no Liver (HepG2) 108348690
chr19 951964 958164 TCF7L2 GTRD no Colon (HCT116) 21830998
chr19 951964 958164 TCF7L2 GTRD no Colon (HCT116) 108348691
chr19 951964 958164 TCF7L2 GTRD no Colon (HCT116) 108348692
chr19 952085 955568 ZNF274 GTRD no Bone Marrow (K562) 21830999
chr19 952085 955568 ZNF274 GTRD no Bone Marrow (K562) 108348693
chr19 952085 955568 ZNF274 GTRD no Bone Marrow (K562) 108348694
chr19 952097 953836 ZNF274 GTRD no Liver (HepG2) 21831000
chr19 952097 953836 ZNF274 GTRD no Liver (HepG2) 108348695
chr19 952145 953248 TCF7L2 GTRD no Colon (HCT116) 21831001
chr19 952145 953248 TCF7L2 GTRD no Colon (HCT116) 108348696
chr19 952223 953473 ZNF274 GTRD no Liver (HepG2) 21831002
chr19 952223 953473 ZNF274 GTRD no Liver (HepG2) 108348697
chr19 952225 957951 TCF7L2 GTRD no Colon (HCT116) 21831003
chr19 952225 957951 TCF7L2 GTRD no Colon (HCT116) 108348698
chr19 952225 957951 TCF7L2 GTRD no Colon (HCT116) 108348699
chr19 952241 955922 ZNF274 GTRD no Bone Marrow (K562) 21831004
chr19 952241 955922 ZNF274 GTRD no Bone Marrow (K562) 108348700
chr19 952241 955922 ZNF274 GTRD no Bone Marrow (K562) 108348701
chr19 952263 953777 ZNF274 GTRD no Liver (HepG2) 21831005
chr19 952263 953777 ZNF274 GTRD no Liver (HepG2) 108348702
chr19 952272 953962 ZNF274 GTRD no Liver (HepG2) 21831006
chr19 952272 953962 ZNF274 GTRD no Liver (HepG2) 108348703
chr19 952292 953281 ZNF274 GTRD no Bone Marrow (K562) 21831007
chr19 952292 953281 ZNF274 GTRD no Bone Marrow (K562) 108348704
chr19 952295 953936 ZNF274 GTRD no Liver (HepG2) 21831008
chr19 952295 953936 ZNF274 GTRD no Liver (HepG2) 108348705
chr19 952310 953763 ZNF274 GTRD no Liver (HepG2) 21831009
chr19 952310 953763 ZNF274 GTRD no Liver (HepG2) 108348706
chr19 952321 953472 ZNF274 GTRD no Liver (HepG2) 21831010
chr19 952321 953472 ZNF274 GTRD no Liver (HepG2) 108348707
chr19 952337 953476 ZNF274 GTRD no Blood (GM12878) 21831011
chr19 952337 953476 ZNF274 GTRD no Blood (GM12878) 108348708
chr19 952339 953437 ZNF274 GTRD no Liver (HepG2) 21831012
chr19 952339 953437 ZNF274 GTRD no Liver (HepG2) 108348709
chr19 952348 953894 TCF7L2 GTRD no Colon (HCT116) 21831013
chr19 952348 953894 TCF7L2 GTRD no Colon (HCT116) 108348710
chr19 952358 953713 ZNF274 GTRD no Liver (HepG2) 21831014
chr19 952358 953713 ZNF274 GTRD no Liver (HepG2) 108348711
chr19 952360 953403 ZNF274 GTRD no Bone Marrow (K562) 21831015
chr19 952360 953403 ZNF274 GTRD no Bone Marrow (K562) 108348712
chr19 952365 953467 ZNF274 GTRD no Blood (GM12878) 21831016
chr19 952365 953467 ZNF274 GTRD no Blood (GM12878) 108348713
chr19 952365 953893 ZNF274 GTRD no Liver (HepG2) 21831017
chr19 952365 953893 ZNF274 GTRD no Liver (HepG2) 108348714
chr19 952369 953566 ZNF274 GTRD no Liver (HepG2) 21831018
chr19 952369 953566 ZNF274 GTRD no Liver (HepG2) 108348715
chr19 952370 953634 ZNF274 GTRD no Liver (HepG2) 21831019
chr19 952370 953634 ZNF274 GTRD no Liver (HepG2) 108348716
chr19 952384 954099 ZNF274 GTRD no Liver (HepG2) 21831020
chr19 952384 954099 ZNF274 GTRD no Liver (HepG2) 108348717
chr19 952389 953492 ZNF274 GTRD no Liver (HepG2) 21831021
chr19 952389 953492 ZNF274 GTRD no Liver (HepG2) 108348718
chr19 952401 953677 ZNF274 GTRD no Liver (HepG2) 21831022
chr19 952401 953677 ZNF274 GTRD no Liver (HepG2) 108348719
chr19 952408 953445 ZNF274 GTRD no Liver (HepG2) 21831023
chr19 952408 953445 ZNF274 GTRD no Liver (HepG2) 108348720
chr19 952414 952433 PAX5 JASPAR yes 111986551
chr19 952418 953567 ZNF274 GTRD no Liver (HepG2) 21831024
chr19 952418 953567 ZNF274 GTRD no Liver (HepG2) 108348721
Genes associated with rs349309[chr19:952429], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr19 925781 975939 + ARID3A ENSG00000116017.6 925781 0 Pancreas 0.0987055 16725