EnhancerDB
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  3. rs34980903[chr19:14478551]
Enhancers that have rs34980903[chr19:14478551]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 14470665 14486095 enh5020
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Muscle (Myotube) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs34980903[chr19:14478551]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 14474907 14478714 ZNF274 GTRD no Bone Marrow (K562) 21853333
chr19 14477770 14478912 ZNF143 GTRD no Epithelial (MCF-7) 21853431
chr19 14477796 14478729 ZNF143 GTRD no Epithelial (MCF-7) 21853432
chr19 14477897 14478794 TCF7L2 GTRD no Colon (HCT116) 21853433
chr19 14478025 14478746 TCF7L2 GTRD no Colon (HCT116) 21853435
chr19 14478108 14478666 TCF7L2 GTRD no Colon (HCT116) 21853436
chr19 14478300 14478850 TCF7L2 GTRD no Colon (HCT116) 21853437
chr19 14478327 14479064 ZNF274 GTRD no Bone Marrow (K562) 21853438
chr19 14478327 14479064 ZNF274 GTRD no Bone Marrow (K562) 108391290
chr19 14478511 14479183 ZNF143 GTRD no Epithelial (MCF-7) 21853439
chr19 14478511 14479183 ZNF143 GTRD no Epithelial (MCF-7) 108391291
chr19 14478546 14478560 TLX1 JASPAR yes 112566586
Genes associated with rs34980903[chr19:14478551], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More