EnhancerDB
  1. Home
  2. SNP
  3. rs35081200[chr1:202048539]
Enhancers that have rs35081200[chr1:202048539]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 202022729 202063855 enh12534
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Epithelial (MCF-7) Stomach Brain (SK-N-SH) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs35081200[chr1:202048539]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 202043783 202048658 ZNF143 GTRD no Epithelial (MCF-7) 21366478
chr1 202043783 202048658 ZNF143 GTRD no Epithelial (MCF-7) 107857652
chr1 202044561 202050029 ZNF143 GTRD no Epithelial (MCF-7) 21366484
chr1 202044561 202050029 ZNF143 GTRD no Epithelial (MCF-7) 107857654
chr1 202045435 202048656 ZNF143 GTRD no Epithelial (MCF-7) 21366534
chr1 202045435 202048656 ZNF143 GTRD no Epithelial (MCF-7) 107857714
chr1 202047899 202048656 ZNF274 GTRD no Liver (HepG2) 21366692
chr1 202048534 202048549 FOXP1 JASPAR yes 34550671
chr1 202048537 202048541 YY1 TRANSFAC yes 34550672
chr1 202048538 202048553 FOXP1 JASPAR yes 34550673
chr1 202048539 202048554 FOXP1 JASPAR yes 34550674
Genes associated with rs35081200[chr1:202048539], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More