EnhancerDB
  1. Home
  2. SNP
  3. rs35200788[chr17:75335906]
Enhancers that have rs35200788[chr17:75335906]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 75332780 75369235 enh17400
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs35200788[chr17:75335906]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 75335892 75335913 IRF1 JASPAR yes 56069205
chr17 75335893 75335908 FOXP1 JASPAR yes 56069206
chr17 75335894 75335906 FOXC2 JASPAR yes 56069208
chr17 75335895 75335910 FOXP1 JASPAR yes 56069209
chr17 75335895 75335915 RREB1 JASPAR yes 56069210
chr17 75335900 75335920 RREB1 JASPAR yes 56069211
chr17 75335904 75335910 TCF4 TRANSFAC yes 56069212
Genes associated with rs35200788[chr17:75335906], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More