EnhancerDB
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  3. rs35309478[chr12:96614160]
Enhancers that have rs35309478[chr12:96614160]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 96582645 96638775 enh14921
Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs35309478[chr12:96614160]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 96613904 96614382 ZNF274 GTRD no Bone Marrow (K562) 108053200
chr12 96614154 96614175 IRF1 JASPAR yes 123049162
chr12 96614155 96614176 IRF1 JASPAR yes 123049163
chr12 96614157 96614178 IRF1 JASPAR yes 123049164
chr12 96614158 96614179 IRF1 JASPAR yes 123049165
chr12 96614159 96614174 FOXP1 JASPAR yes 123049166
chr12 96614159 96614180 IRF1 JASPAR yes 123049167
chr12 96614160 96614175 FOXP1 JASPAR yes 123049168
chr12 96614160 96614181 IRF1 JASPAR yes 123049169
Genes associated with rs35309478[chr12:96614160], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More