EnhancerDB
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  3. rs35404088[chr12:50605265]
Enhancers that have rs35404088[chr12:50605265]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 50600876 50615015 enh2345
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Blood (OCI-LY7) Lung (A549) Blood (GM12878) Muscle (A673) Placenta Colon (HCT116) Stomach Blood (Karpas-422) Lung (PC-9) Pancreas (Panc1) Uterus Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs35404088[chr12:50605265]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 50605262 50605277 FOXP1 JASPAR yes 120818713
chr12 50605263 50605278 FOXP1 JASPAR yes 120818714
chr12 50605264 50605270 TBP TRANSFAC yes 120818715
chr12 50605264 50605279 FOXP1 JASPAR yes 120818716
chr12 50605265 50605280 FOXP1 JASPAR yes 120818717
chr12 50605265 50605286 IRF1 JASPAR yes 120818718
Genes associated with rs35404088[chr12:50605265], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More