EnhancerDB
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  3. rs35466540[chr1:202024219]
Enhancers that have rs35466540[chr1:202024219]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 202022729 202063855 enh12534
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Epithelial (MCF-7) Stomach Brain (SK-N-SH) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs35466540[chr1:202024219]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 202017017 202024420 ZNF143 GTRD no Epithelial (MCF-7) 21365826
chr1 202017017 202024420 ZNF143 GTRD no Epithelial (MCF-7) 21365827
chr1 202021487 202024259 ZNF143 GTRD no Epithelial (MCF-7) 21365962
chr1 202023615 202024245 ZNF143 GTRD no Epithelial (MCF-7) 21366049
chr1 202023955 202024257 ZNF274 GTRD no Bone Marrow (K562) 21366050
chr1 202024203 202024223 RREB1 JASPAR yes 34547051
chr1 202024214 202024219 ETS2 TRANSFAC yes 34547053
Genes associated with rs35466540[chr1:202024219], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More